Element details

Project element Leader(s) Lead participant Assigned people Participant Description Deadline Status
Develop strategic priorities for DNA library creation of NH collections Task 2.2.2

NBC

Creation and use of DNA Libraries (developed in SYNTHESYS2) will be reviewed for feasibility of implementation at institutional scale by European NH institutions. Host a two day workshop to assess the scope and protocols for common integration. Day one will be used to demonstrate the outputs of the previous
SYNTHESYS JRA outcomes, which are methodologies for optimal extraction of DNA from NH collections. Day two will be used to agree priorities and integrated strategies for the creation of DNA libraries.

Mon, 2015-08-31 01:00 In progress
Develop strategic priorities for barcoding of NH collections Task 2.2.1

NBC

Working alongside members of IBOL, create a common strategy for prioritising the barcoding of NH collections. Host workshop of NH institutions and key IBOL members to achieve this aim. CETAF, SPNHC, CPB, ECBOL and LifeWatch will be used to recruit institutions outside the Consortium to adopt the policy, ensuring a coordinated action across Europe.

Thu, 2015-12-31 (All day) In progress
Developing strategic priorities for molecular related NH collections Objective 2.2

NBC


Mon, 2016-10-31 (All day) In progress
Develop policies for new physical CM Task 2.1.3

MfN

Collate existing European policies that relate to new physical collections and use these as a basis to agree recommendations for common European CM policies and procedures. A meeting will be held with representatives from outside the Consortium to discuss and refine the policies. The recommendations will
include areas such as optimal storage, cost of access/sustainability, data integration, and acquisition, access and use regulations (in agreement with ABS/CBD). Promotion as task 1.1. Horizon scanning will be an integral part of this task.

Thu, 2015-12-31 (All day) In progress
Produce handbook of best practice and standards for 3D imaging of NH specimens Task 2.1.2

MfN

To get an overview of all relevant 3D techniques, software and equipment, a handbook of best practice for 3D imaging will be produced. The handbook will use JRA obj. 2 results and include recommendations concerning which techniques should be used for different types of object, and which technical standards exist for creating a 3D image and for visualisation of the images.

International groups working on 3D imaging will be invited to a workshop to discuss the handbook content and to horizon scan the domain. Chapters will be written by working groups constituted at the workshop (including others deemed relevant). The results will be used by JRA Objective 4.

Sat, 2016-04-30 01:00 In progress
Develop policies for virtual CM and integrate JRA outputs Task 2.1.1

MfN

Collate existing European virtual collection policies and use these as a basis for recommendations on a common European virtual data management policies and procedures. A meeting will be held with external representatives to discuss and refine the policies. Recommendations will include areas such as sustainable storage, open access (e.g. links with Europeana/GBIF), and IPR and Access and Benefit Sharing. In conjunction with NA3, policies will be promoted via CPB, CETAF, SPNHC and national fora. All policies will be placed on EU-CoM. JRA outputs will be included into policies to ensure that data generated from the new digital extraction techniques and crowdsourcing are fully integrated.

Tue, 2016-08-30 01:00 In progress
Managing new (virtual and physical) collections Objective 2.1

MfN

Wed, 2017-08-30 01:00 In progress
Improving collections management and enhancing accessibility WP2 (NA2)

MfN

Improving collections management and enhancing accessibility.

Type of activity COORD
Start month 1
End month 48

Main Idea: To provide a coherent, integrated management approach that will enable NH collections to
meet the expanding needs of Users, with particular focus on the development of and access to virtual
and new physical collections.

The tools, standards and training provided by SYNTHESYS1&2 NAs have proved successful in improving collections management of traditional European NH collections (e.g. alcohol-preserved specimens, desiccated plants and insects, bones and minerals). There is a demand from both NH institutions and the User community to move the focus from improving collections management of traditional collections to developing that for their growing virtual and new physical collections. NA2 will meet the demand by developing collection management policies and strategic priorities for open and flexible access to virtual and new physical collections. To ensure the wider uptake of these policies outside the Consortium, NA2 will collaborate with other European and international initiatives such as the Collections Policy Board (CPB), LifeWatch, BioNET, IBOL, and International Society for Biological and Environmental Repositories (ISBER) on shared policy creation, promotion and implementation. The resultant recommendations and supporting documentation will be made openly available via EU-CoM (an online collection management handbook created by SYNTHESYS2). NH institutions are generating increasing amounts of virtual collections data as NH institutions enter the realm of the systematics of morphologically indistinct micro-organisms. As for some organisms (e.g. some protists) a video of the specimen is considered the type, as the physical entity cannot be stored using conventional curatorial methods. Furthermore, virtual collections can add value to original specimens when a digital surrogate is enriched with analytical data. For example the mining and resources industry is interested in gaining access to the chemical analysis data associated with mineralogical collections. The policies created will ensure that these collections are as accessible as
the traditional physical collections DNA and tissue banks are areas of rapid development and contribute to the CBD by storing and providing access to material that is a key source for biological research. NH repositories are working in a disparate way making access difficult. NA2 will work with non-NH biological resource centres to create a network of DNA and tissue banks. This network will improve access to the materials stored within these banks by ensuring that collections are stored to agreed standards, comply with quality control measures and provide easy access with a single searchable database.
SYNTHESYS2 developed the Collections Self-Assessment Tool (CSAT) which allows institutions to assess whether the management of their collections meets the SYNTHESYS benchmarks. NA2 and NA3 will promote the wider use of the CSAT and continue to provide feedback reports with recommendations for improvement. Institutions will be encouraged to re-use the CSAT every 3-5 years to test whether their collections management is improving. The CSAT will be updated to include questions on management of new physical and virtual collections to assess uptake of the SYNTHESYS policies. 

Wed, 2017-08-30 (All day) In progress
SAB Meeting 1 MS30

NHM

SAB Meeting 1

Mon, 2013-09-30 01:00 In progress
SAB Meeting 2 MS31

NHM

SAB Meeting 2

Thu, 2014-07-31 01:00 In progress

Pages

Scratchpads developed and conceived by (alphabetical): Ed Baker, Katherine Bouton Alice Heaton Dimitris Koureas, Laurence Livermore, Dave Roberts, Simon Rycroft, Ben Scott, Vince Smith